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IDSCAB82901 TypeCDS
From955707 nt length1161
To956867 aa length386
GenersmC pI6.61
Definitionputative ribosomal RNA small subunit methyltransferase M.W (Da)41724
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1444 putative ribosomal RNA small subunit methyltransferase6045.0e-174
coelSCO1041 hypothetical protein5647.0e-162
sgrSGR_6774 putative ribosomal RNA small subunit methyltransferase5162.0e-147
nfarnfa48380 hypothetical protein1372.0e-33

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

MTS1Methyltransferase small domain211-381185.07.2e-55

Methyltransf_251Methyltransferase domain243-34553.03.8e-14

Methyltransf_311Methyltransferase domain241-34944.31.4e-11

Methyltransf_111Methyltransferase domain244-34840.43e-10

Methyltransf_121Methyltransferase domain244-34737.92e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
KFG06807.1 50S rRNA methyltransferase [Streptomyces scabiei] 19650.0e+00
WP_041670143.1 50S rRNA methyltransferase [Streptomyces scabiei] 19570.0e+00
WP_061335631.1 50S rRNA methyltransferase [Streptomyces scabiei] 19490.0e+00
WP_037726513.1 50S rRNA methyltransferase [Streptomyces scabiei] 19430.0e+00
WP_059084344.1 50S rRNA methyltransferase [Streptomyces scabiei] >dbj 19230.0e+00
EMF58089.1 hypothetical protein SBD_0761 [Streptomyces bottropensis ATCC 254... 17820.0e+00
WP_060894282.1 50S rRNA methyltransferase [Streptomyces europaeiscabiei] 17660.0e+00
KND46533.1 50S rRNA methyltransferase [Streptomyces stelliscabiei] 17650.0e+00
WP_020114623.1 50S rRNA methyltransferase [Streptomyces bottropensis] 17580.0e+00
WP_086752176.1 50S rRNA methyltransferase [Streptomyces scabiei] 17560.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear