-- | --

IDSCAB85661 TypeCDS
From564330 nt length654
To563677 aa length217
GenernhA pI8.48
Definitionputative ribonuclease H M.W (Da)22864
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1138 putative ribonuclease H3179.0e-88
coelSCO7284 putative ribonuclease H3113.0e-86
sgrSGR_6591 putative ribonuclease H2509.0e-68
saceSACE_6195 ribonuclease HI756.0e-15
nfarnfa56240 putative RNase HI793.0e-16

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

RNase_H1RNase H16-12180.99e-23

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_078580269.1 ribonuclease HI [Streptomyces scabiei] 8857.5e-120
WP_078852419.1 ribonuclease HI [Streptomyces scabiei] >gb 8841.5e-119
EMF57806.1 ribonuclease H [Streptomyces bottropensis ATCC 25435] 8811.6e-119
WP_079081575.1 ribonuclease HI [Streptomyces scabiei] >dbj 8771.3e-118
WP_028796765.1 ribonuclease HI [Streptomyces bottropensis] 8711.2e-117
WP_078907291.1 ribonuclease HI [Streptomyces stelliscabiei] >gb 8441.8e-113
WP_079024015.1 ribonuclease HI [Streptomyces scabiei] >gb 8381.1e-112
WP_078935233.1 ribonuclease HI [Streptomyces europaeiscabiei] 8283.5e-111
WP_086752795.1 ribonuclease HI [Streptomyces scabiei] 8145.3e-109
WP_086799048.1 ribonuclease HI [Streptomyces scabiei] 8101.9e-108

PSORT result

LocalizationCertaintyPSORT said
Not Clear