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IDSCAB85981 TypeCDS
From537760 nt length843
To536918 aa length280
Genesig pI6.53
Definitionputative RNA polymerase sigma factor M.W (Da)31022
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO7314 probable RNA polymerase sigma factor.4191.0e-118
sgrSGR_6446 putative RNA polymerase sigma factor3354.0e-93

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Sigma70_r21Sigma-70 region 254-12267.46.2e-19

Sigma70_r41Sigma-70, region 4222-27064.54.2e-18

Sigma70_r4_21Sigma-70, region 4217-26738.94.4e-10

Sigma70_r31Sigma-70 region 3133-18932.65.8e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_060879757.1 SigB/SigF/SigG family RNA polymerase sigma factor [Streptomy... 14440.0e+00
WP_059078665.1 SigB/SigF/SigG family RNA polymerase sigma factor [Streptomy... 14210.0e+00
WP_005474205.1 MULTISPECIES: SigB/SigF/SigG family RNA polymerase sigma fac... 13710.0e+00
WP_045555565.1 MULTISPECIES: SigB/SigF/SigG family RNA polymerase sigma fac... 13490.0e+00
WP_037692281.1 MULTISPECIES: SigB/SigF/SigG family RNA polymerase sigma fac... 13290.0e+00
WP_033526130.1 SigB/SigF/SigG family RNA polymerase sigma factor [Streptomy... 13280.0e+00
WP_060892386.1 SigB/SigF/SigG family RNA polymerase sigma factor [Streptomy... 13250.0e+00
WP_086752475.1 SigB/SigF/SigG family RNA polymerase sigma factor [Streptomy... 13190.0e+00
WP_086753718.1 SigB/SigF/SigG family RNA polymerase sigma factor [Streptomy... 13160.0e+00
WP_055521168.1 SigB/SigF/SigG family RNA polymerase sigma factor [Streptomy... 12422.5e-172

PSORT result

LocalizationCertaintyPSORT said
Not Clear