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IDSCAB87631 TypeCDS
From374728 nt length291
To374438 aa length96
GenecspD pI4.68
Definitionputative cold shock protein M.W (Da)10293
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO0527 scoF cold shock protein1303.0e-32
sgrSGR_462 putative cold shock protein1303.0e-32
nfarnfa42250 putative cold shock protein1057.0e-25

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

CSD1'Cold-shock' DNA-binding domain32-95106.54e-31

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
EMF57645.1 cold shock protein [Streptomyces bottropensis ATCC 25435] 5011.4e-65
GAQ60660.1 cold shock protein ScoF [Streptomyces scabiei] 4984.8e-65
WP_030242128.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3497.8e-43
WP_093872186.1 cold-shock protein [Streptomyces sp. TLI_105] >emb 3471.7e-42
WP_079408654.1 cold-shock protein [Streptomyces sp. 3211] 3472.2e-42
WP_030212004.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3462.3e-42
WP_048475199.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3462.7e-42
WP_030303412.1 MULTISPECIES: cold-shock protein [Streptomyces] 3462.7e-42
WP_028796778.1 cold-shock protein [Streptomyces bottropensis] 3463.1e-42
WP_043231285.1 cold-shock protein [Streptomyces sp. NRRL F-5193] 3453.6e-42

PSORT result

LocalizationCertaintyPSORT said
Not Clear