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IDSCO0193 TypeCDS
From8482711 nt length1005
To8483715 aa length334
Gene pI10.27
Definitionputative DNA-binding regulator M.W (Da)35255
NoteSCJ12.05c AseI frg.J
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1214 putative MerR-family transcriptional regulator3116.0e-86
sgrSGR_817 putative MerR-family transcriptional regulator3187.0e-88
samSAM23877_7076 putative DNA-binding regulator5090.0e+00
scabSCAB5421 putative MerR-family transcriptional regulator3257.0e-90
saceSACE_6713 DNA-binding regulator1364.0e-33
nfarnfa30640 putative transcriptional regulator1123.0e-26

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

MerR_11MerR HTH family regulatory protein23-9047.81e-12

B12-binding_21B12 binding domain130-20035.21.2e-08

B12-binding1B12 binding domain214-30232.75.8e-08

MerR1MerR family regulatory protein23-5928.31e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003978674.1 MULTISPECIES: MerR family transcriptional regulator [Strepto... 13450.0e+00
WP_202492393.1 MULTISPECIES: MerR family transcriptional regulator [Strepto... 13420.0e+00
WP_030862114.1 MULTISPECIES: MerR family transcriptional regulator [Strepto... 13350.0e+00
WP_136207245.1 MerR family transcriptional regulator [Streptomyces sp. LRa1... 13330.0e+00
WP_189285189.1 MerR family transcriptional regulator [Streptomyces anthocya... 13300.0e+00
WP_121717257.1 MerR family transcriptional regulator [Streptomyces sp. E5N9... 13260.0e+00
WP_210983538.1 MerR family transcriptional regulator [Streptomyces sp. RK76... 13250.0e+00
WP_115746237.1 MerR family transcriptional regulator [Streptomyces sp. CB09... 12281.4e-167
WP_159323425.1 MerR family transcriptional regulator [Streptomyces tendae] 12193.0e-166
WP_102932075.1 MerR family transcriptional regulator [Streptomyces diastati... 12123.6e-165

PSORT result

LocalizationCertaintyPSORT said
Not Clear