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IDSCO0315 TypeCDS
From8352453 nt length1359
To8353811 aa length452
Gene pI4.83
Definitionputative decarboxylase M.W (Da)47228
NoteSC5G9.24c AseI frg.F
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3497 putative diaminopimelate decarboxylase4241.0e-119
sgrSGR_773 putative decarboxylase5302.0e-151
samSAM23877_3125 putative Diaminopimelate decarboxylase5023.0e-177
scabSCAB54691 putative diaminopimelate decarboxylase5094.0e-145

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Orn_Arg_deC_N1Pyridoxal-dependent decarboxylase, pyridoxal binding domain54-287132.12e-38

Orn_DAP_Arg_deC1Pyridoxal-dependent decarboxylase, C-terminal sheet domain342-40534.41.8e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011027010.1 MULTISPECIES: diaminopimelate decarboxylase [Streptomyces] >... 22290.0e+00
WP_003978549.1 MULTISPECIES: diaminopimelate decarboxylase [Streptomyces] >... 22240.0e+00
WP_189284200.1 diaminopimelate decarboxylase [Streptomyces anthocyanicus] >... 22200.0e+00
WP_030862327.1 MULTISPECIES: diaminopimelate decarboxylase [Streptomyces] >... 22200.0e+00
WP_136207281.1 diaminopimelate decarboxylase [Streptomyces sp. LRa12] >lcl 22180.0e+00
WP_121716901.1 diaminopimelate decarboxylase [Streptomyces sp. E5N91] 22130.0e+00
WP_106517023.1 diaminopimelate decarboxylase [Streptomyces sp. 111WW2] >gb 22130.0e+00
NEC35322.1 diaminopimelate decarboxylase [Streptomyces rubrogriseus] 21940.0e+00
WP_109031118.1 diaminopimelate decarboxylase [Streptomyces rubrogriseus] 21920.0e+00
WP_203696512.1 diaminopimelate decarboxylase [Streptomyces rubrogriseus] 21870.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear