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IDSCO0322 TypeCDS
From8343570 nt length1695
To8345264 aa length564
Gene pI9.95
Definitionputative ABC transport ATP-binding subunit M.W (Da)60616
NoteSC5G9.31c SCF12.01c AseI frg.F
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
sgrSGR_6658 putative ABC transporter ATP-binding protein4326.0e-122
samSAM23877_5614 ABC transporter ATP-binding protein6130.0e+00
saceSACE_3684 putative antibiotic ABC transporter protein,ATP-binding2426.0e-65
nfarnfa24920 putative ABC transporter ATP-binding protein3472.0e-96

*sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC_tran2ABC transporter21-190, 376-499177.51.6e-52

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011027017.1 MULTISPECIES: TlrC/CarA/OleB/SrmB family ABC-F type ribosoma... 23480.0e+00
WP_003978543.1 MULTISPECIES: TlrC/CarA/OleB/SrmB family ABC-F type ribosoma... 23420.0e+00
WP_136208638.1 TlrC/CarA/OleB/SrmB family ABC-F type ribosomal protection p... 23390.0e+00
WP_093455347.1 MULTISPECIES: TlrC/CarA/OleB/SrmB family ABC-F type ribosoma... 23390.0e+00
WP_106517596.1 TlrC/CarA/OleB/SrmB family ABC-F type ribosomal protection p... 23350.0e+00
WP_164275653.1 TlrC/CarA/OleB/SrmB family ABC-F type ribosomal protection p... 22440.0e+00
WP_109031109.1 TlrC/CarA/OleB/SrmB family ABC-F type ribosomal protection p... 22380.0e+00
WP_121716890.1 TlrC/CarA/OleB/SrmB family ABC-F type ribosomal protection p... 22100.0e+00
WP_121750928.1 TlrC/CarA/OleB/SrmB family ABC-F type ribosomal protection p... 19920.0e+00
WP_127891920.1 TlrC/CarA/OleB/SrmB family ABC-F type ribosomal protection p... 19710.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear