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IDSCO0376 TypeCDS
From8276276 nt length603
To8275674 aa length200
Gene pI7.79
Definitionputative transcriptional regulator M.W (Da)22341
NoteSCF62.02 AseI frg.F
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
sgrSGR_6926 putative transcriptional regulator3253.0e-90
samSAM23877_7182 putative transcriptional regulator3372.0e-120

*sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_31Helix-turn-helix19-7354.67.8e-15

HTH_311Helix-turn-helix domain18-7350.22.1e-13

HTH_191Helix-turn-helix domain17-7944.21.4e-11

Cupin_21Cupin domain111-17736.62.5e-09

HTH_261Cro/C1-type HTH DNA-binding domain18-7732.86.3e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011027066.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 10263.6e-141
WP_003978489.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 10202.3e-140
WP_121709681.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 10142.0e-139
WP_093455372.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 10116.0e-139
AIJ18087.2 transcriptional regulator [Streptomyces lividans TK24] >gb 10071.9e-138
MYS76405.1 helix-turn-helix domain-containing protein [Streptomyces sp. SID5... 10072.7e-138
WP_109031071.1 helix-turn-helix transcriptional regulator [Streptomyces rub... 10021.7e-137
WP_164270616.1 helix-turn-helix transcriptional regulator [Streptomyces rub... 9933.6e-136
WP_063124320.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 9821.9e-134
WP_189743589.1 helix-turn-helix transcriptional regulator [Streptomyces ten... 9787.5e-134

PSORT result

LocalizationCertaintyPSORT said
Not Clear