-- | --

IDSCO0599 TypeCDS
From8028707 nt length930
To8027778 aa length309
Gene pI5.07
Definitionputative regulator of sig8 M.W (Da)32623
NoteSCF55.23 AseI frg.F
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_7158 putative regulator of sigma factor3632.0e-101
samSAM23877_6931 putative anti-sigma factor%2C regulator of HasL and HasR5140.0e+00
scabSCAB87131 putative anti-sigma factor4092.0e-115
saceSACE_4200 regulator of sigma factor3283.0e-91
nfarnfa18850 hypothetical protein3362.0e-93

*avm, Streptomyces avermitilis; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

MEDS1MEDS: MEthanogen/methylotroph, DcmR Sensory domain12-155118.71.8e-34

HATPase_c_21Histidine kinase-like ATPase domain197-30560.71.2e-16

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011027235.1 MULTISPECIES: MEDS domain-containing protein [Streptomyces] ... 14230.0e+00
WP_003978262.1 MULTISPECIES: MEDS domain-containing protein [Streptomyces] ... 14160.0e+00
WP_093455442.1 MULTISPECIES: MEDS domain-containing protein [unclassified S... 14120.0e+00
WP_030862799.1 MULTISPECIES: MEDS domain-containing protein [Streptomyces] ... 14120.0e+00
CAB55832.1 putative regulator of SigJ [Streptomyces coelicolor A3(2)] 14110.0e+00
WP_136209278.1 MEDS domain-containing protein [Streptomyces sp. LRa12] >lcl... 14050.0e+00
WP_121710476.1 MEDS domain-containing protein [Streptomyces sp. E5N91] 13900.0e+00
WP_109030872.1 sensor histidine kinase [Streptomyces rubrogriseus] 13720.0e+00
WP_164278528.1 sensor histidine kinase [Streptomyces rubrogriseus] >gb 13590.0e+00
MYS73784.1 sensor histidine kinase [Streptomyces sp. SID5926] 13580.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear