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IDSCO0755 TypeCDS
From7869788 nt length2223
To7867566 aa length740
Gene pI9.89
Definitionputative ABC transporter M.W (Da)79858
NoteSCF81.14 AseI frg.F
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_7493 putative ABC transporter ATP-binding protein12480.0e+00
samSAM23877_6773 putative ABC transporter13660.0e+00
scabSCAB8701 putative ABC transporter ATP-binding protein12930.0e+00

*avm, Streptomyces avermitilis; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Peptidase_C391Peptidase C39 family30-161133.73e-39

ABC_tran1ABC transporter524-672100.21.2e-28

ABC_membrane1ABC transporter transmembrane region191-45785.34.8e-24

Peptidase_C701Papain-like cysteine protease AvrRpt229-14920.60.00031

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011027333.1 MULTISPECIES: NHLP family bacteriocin export ABC transporter... 32400.0e+00
WP_202492406.1 MULTISPECIES: NHLP family bacteriocin export ABC transporter... 32380.0e+00
WP_193484480.1 MULTISPECIES: NHLP family bacteriocin export ABC transporter... 32340.0e+00
WP_189282727.1 NHLP family bacteriocin export ABC transporter peptidase/per... 32330.0e+00
WP_003978106.1 MULTISPECIES: NHLP family bacteriocin export ABC transporter... 32300.0e+00
WP_030872256.1 MULTISPECIES: NHLP family bacteriocin export ABC transporter... 32280.0e+00
WP_121715706.1 NHLP family bacteriocin export ABC transporter peptidase/per... 32270.0e+00
REH19073.1 NHLM bacteriocin system ABC transporter peptidase/ATP-binding pro... 32230.0e+00
MYS69885.1 NHLP family bacteriocin export ABC transporter peptidase/permease... 32150.0e+00
NEC31812.1 NHLP family bacteriocin export ABC transporter peptidase/permease... 32130.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear