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IDSCO0928 TypeCDS
From7691052 nt length2145
To7693196 aa length714
Gene pI4.81
Definitionhypothetical protein M.W (Da)77615
NoteSCM10.16c AseI frg.M
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_7304 hypothetical protein11910.0e+00
sgrSGR_709 conserved hypothetical protein11220.0e+00
samSAM23877_6614 hypothetical protein13180.0e+00
scabSCAB11501 hypothetical protein12180.0e+00
saceSACE_7137 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)6217.0e-179
nfarnfa49160 hypothetical protein2681.0e-72

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

EAL1EAL domain456-698233.81.8e-69

GGDEF1Diguanylate cyclase, GGDEF domain279-435147.72.1e-43

PAS_41PAS fold164-26945.95.1e-12

PAS_91PAS domain165-26745.37.5e-12

PAS_31PAS fold176-25637.02.7e-09

PAS1PAS fold154-26336.63.4e-09

PAS_81PAS domain153-19327.02.9e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011027451.1 MULTISPECIES: cyclic Di-GMP phosphodiesterase RmdA [Streptom... 34140.0e+00
WP_003977931.1 MULTISPECIES: cyclic Di-GMP phosphodiesterase RmdA [Streptom... 34060.0e+00
WP_016325540.1 cyclic Di-GMP phosphodiesterase RmdA [Streptomyces lividans]... 34000.0e+00
WP_210914360.1 MULTISPECIES: EAL domain-containing protein [unclassified St... 33910.0e+00
WP_127894298.1 cyclic Di-GMP phosphodiesterase RmdA [Streptomyces sp. S10(2... 33850.0e+00
NEV85818.1 cyclic Di-GMP phosphodiesterase RmdA [Streptomyces tendae] 33850.0e+00
WP_115740649.1 cyclic Di-GMP phosphodiesterase RmdA [Streptomyces sp. CB090... 33760.0e+00
WP_189748282.1 cyclic Di-GMP phosphodiesterase RmdA [Streptomyces tendae] >... 33700.0e+00
WP_087805228.1 cyclic Di-GMP phosphodiesterase RmdA [Streptomyces sp. CS113... 33690.0e+00
WP_076972939.1 MULTISPECIES: cyclic Di-GMP phosphodiesterase RmdA [unclassi... 33660.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear