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IDSCO0945 TypeCDS
From7676396 nt length864
To7677259 aa length287
Gene pI8.63
Definitionputative formamidopyrimidine-DNA glycosylase M.W (Da)30970
NoteSCM10.34c AseI frg.M
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_7289 putative formamidopyrimidine-DNA glycosylase4592.0e-130
sgrSGR_724 putative formamidopyrimidine-DNA glycosylase4353.0e-123
samSAM23877_6595 putative formamidopyrimidine-DNA glycosylase5440.0e+00
scabSCAB11651 putative formamidopyrimidine-DNA glycosylase4631.0e-131
saceSACE_0114 formamidopyrimidine-DNA glycosylase3123.0e-86
nfarnfa50200 putative formamidopyrimidine-DNA glycosylase3114.0e-86

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

H2TH1Formamidopyrimidine-DNA glycosylase H2TH domain137-22277.26.5e-22

Fapy_DNA_glyco1Formamidopyrimidine-DNA glycosylase N-terminal domain1-10563.22.9e-17

zf-FPG_IleRS1Zinc finger found in FPG and IleRS244-27136.04.1e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011027460.1 MULTISPECIES: Fpg/Nei family DNA glycosylase [Streptomyces] ... 13930.0e+00
WP_003977915.1 MULTISPECIES: Fpg/Nei family DNA glycosylase [Streptomyces] ... 13880.0e+00
WP_191848845.1 Fpg/Nei family DNA glycosylase [Streptomyces anthocyanicus] ... 13870.0e+00
WP_093455537.1 MULTISPECIES: Fpg/Nei family DNA glycosylase [Streptomyces] ... 13840.0e+00
WP_121710417.1 zf-TFIIB domain-containing protein [Streptomyces sp. E5N91] 13830.0e+00
WP_136208837.1 Fpg/Nei family DNA glycosylase [Streptomyces sp. LRa12] >lcl... 13800.0e+00
WP_087805254.1 Fpg/Nei family DNA glycosylase [Streptomyces sp. CS113] >gb 13680.0e+00
WP_164279180.1 Fpg/Nei family DNA glycosylase [Streptomyces rubrogriseus] >... 13680.0e+00
WP_115740663.1 Fpg/Nei family DNA glycosylase [Streptomyces sp. CB09001] >g... 13640.0e+00
WP_104632736.1 Fpg/Nei family DNA glycosylase [Streptomyces sp. MH60] >gb 13630.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear