-- | --

IDSCO1147 TypeCDS
From7461610 nt length1878
To7459733 aa length625
Gene pI5.54
Definitionputative ABC transporter transmembrane subunit M.W (Da)66207
NoteSCG8A.01 AseI frg.G
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1569 putative ABC transporter permease protein8430.0e+00
sgrSGR_6324 putative ABC transporter ATPase and permease component8300.0e+00
samSAM23877_1230 putative ABC transporter transmembrane subunit10520.0e+00
scabSCAB80051 putative ABC transporter permease protein9010.0e+00
saceSACE_7156 ABC transporter, ATP-binding/permease protein2503.0e-67

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC_membrane1ABC transporter transmembrane region100-30381.47.4e-23

ABC_tran1ABC transporter395-50444.12.5e-11

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011027609.1 MULTISPECIES: ABC transporter ATP-binding protein/permease [... 29500.0e+00
WP_191848795.1 ABC transporter ATP-binding protein/permease [Streptomyces a... 29430.0e+00
WP_003977684.1 MULTISPECIES: ABC transporter ATP-binding protein/permease [... 29330.0e+00
WP_136207881.1 ABC transporter ATP-binding protein/permease [Streptomyces s... 29300.0e+00
WP_121716650.1 ABC transporter ATP-binding protein/permease [Streptomyces s... 29130.0e+00
WP_164271642.1 ABC transporter ATP-binding protein/permease [Streptomyces r... 29070.0e+00
WP_109030352.1 ABC transporter ATP-binding protein/permease [Streptomyces r... 28870.0e+00
MYS71366.1 ATP-binding cassette domain-containing protein [Streptomyces sp. ... 28850.0e+00
WP_115740825.1 ABC transporter ATP-binding protein/permease [Streptomyces s... 28590.0e+00
WP_210976088.1 ATP-binding cassette domain-containing protein [Streptomyces... 28320.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear