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IDSCO1173 TypeCDS
From7431893 nt length1260
To7430634 aa length419
Gene pI7.43
Definitionputative transcriptional regulator M.W (Da)44650
NoteSCG11A.04 AseI frg.G
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_7178 putative transcriptional regulator5646.0e-162
sgrSGR_350 putative transcriptional regulator5331.0e-152
samSAM23877_1261 putative 47.3 kDa protein in thcA 5'region7110.0e+00
scabSCAB79821 putative transcriptional regulator6470.0e+00
nfarnfa50640 putative transcriptional regulator1989.0e-52

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

GAF1GAF domain105-21335.21.4e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011027627.1 MULTISPECIES: GAF domain-containing protein [Streptomyces] >... 17630.0e+00
GHB93457.1 transcriptional regulator [Streptomyces anthocyanicus] 17620.0e+00
WP_038535215.1 MULTISPECIES: GAF domain-containing protein [Streptomyces] >... 17550.0e+00
GGL23013.1 transcriptional regulator [Streptomyces anthocyanicus] >dbj 17540.0e+00
EOY46167.1 GAF domain-containing protein / Signal transduction response regu... 17520.0e+00
WP_121716678.1 GAF domain-containing protein [Streptomyces sp. E5N91] 17470.0e+00
WP_210984165.1 GAF domain-containing protein [Streptomyces sp. RK76] >lcl 17470.0e+00
WP_109030331.1 GAF domain-containing protein [Streptomyces rubrogriseus] 17420.0e+00
WP_164275161.1 GAF domain-containing protein [Streptomyces rubrogriseus] >g... 17320.0e+00
WP_031081795.1 MULTISPECIES: GAF domain-containing protein [Streptomyces] >... 16870.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear