-- | --

IDSCO1220 TypeCDS
From7375391 nt length762
To7376152 aa length253
Gene pI6.69
Definitionputative regulatory protein M.W (Da)28276
Note2SCG58.20c AseI frg.G
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_7115 putative regulatory protein3871.0e-108
sgrSGR_723 putative two-component system response regulator3501.0e-97
samSAM23877_1300 putative regulatory protein4632.0e-168
scabSCAB78501 putative regulatory protein4323.0e-122
saceSACE_0117 response regulator, two-component system2093.0e-55
nfarnfa17970 putative two-component system response regulator2092.0e-55

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

LytTR1LytTr DNA-binding domain157-24976.41.4e-21

Response_reg1Response regulator receiver domain5-12367.31.1e-18

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003977611.1 MULTISPECIES: LytTR family DNA-binding domain-containing pro... 11711.6e-161
WP_115740914.1 LytTR family DNA-binding domain-containing protein [Streptom... 11572.0e-159
WP_164385604.1 MULTISPECIES: LytTR family DNA-binding domain-containing pro... 11502.0e-158
WP_186778198.1 LytTR family DNA-binding domain-containing protein [Streptom... 11493.5e-158
WP_153180938.1 MULTISPECIES: LytTR family DNA-binding domain-containing pro... 11493.6e-158
WP_087792112.1 LytTR family DNA-binding domain-containing protein [Streptom... 11441.6e-157
WP_061447201.1 MULTISPECIES: LytTR family DNA-binding domain-containing pro... 11442.0e-157
WP_104632583.1 LytTR family DNA-binding domain-containing protein [Streptom... 11415.2e-157
WP_133886907.1 LytTR family DNA-binding domain-containing protein [Streptom... 11408.6e-157
WP_125633607.1 MULTISPECIES: LytTR family DNA-binding domain-containing pro... 11381.7e-156

PSORT result

LocalizationCertaintyPSORT said
Not Clear