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IDSCO1299 TypeCDS
From7293405 nt length447
To7292959 aa length148
Gene pI7.67
Definitionputative transcriptional regulatory protein M.W (Da)16330
NoteSCBAC36F5.10 AseI frg.G
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_7057 putative AsnC-family transcriptional regulator2591.0e-70
sgrSGR_6251 putative AsnC-family transcriptional regulator2583.0e-70
samSAM23877_1379 putative transcriptional regulatory protein2801.0e-99
scabSCAB77891 putative AsnC-family transcriptional regulator2713.0e-74
saceSACE_4704 AsnC-family transcriptional regulator992.0e-22

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_AsnC-type1AsnC-type helix-turn-helix domain7-4765.42.6e-18

HTH_241Winged helix-turn-helix DNA-binding7-5363.58.5e-18

AsnC_trans_reg1Lrp/AsnC ligand binding domain79-13852.92.4e-14

MarR_21MarR family8-5337.61.4e-09

MarR1MarR family9-5335.85.2e-09

HTH_201Helix-turn-helix domain12-5330.32.9e-07

HTH_51Bacterial regulatory protein, arsR family12-5226.34.4e-06

HTH_IclR1IclR helix-turn-helix domain12-5224.12.1e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003977532.1 MULTISPECIES: Lrp/AsnC family transcriptional regulator [Str... 7621.2e-102
WP_007447234.1 MULTISPECIES: Lrp/AsnC family transcriptional regulator [Str... 7585.0e-102
WP_087810552.1 MULTISPECIES: Lrp/AsnC family transcriptional regulator [Str... 7575.4e-102
WP_121714946.1 Lrp/AsnC family transcriptional regulator [Streptomyces sp. ... 7568.1e-102
WP_164141113.1 Lrp/AsnC family transcriptional regulator [Streptomyces coel... 7541.9e-101
EOY46298.1 Leucine-responsive regulatory protein [Streptomyces lividans 1326... 7562.5e-101
WP_076973323.1 MULTISPECIES: Lrp/AsnC family transcriptional regulator [Str... 7532.5e-101
WP_127896875.1 Lrp/AsnC family transcriptional regulator [Streptomyces sp. ... 7532.7e-101
WP_159324768.1 Lrp/AsnC family transcriptional regulator [Streptomyces tend... 7532.9e-101
WP_030189269.1 Lrp/AsnC family transcriptional regulator [Streptomyces viol... 7523.4e-101

PSORT result

LocalizationCertaintyPSORT said
Not Clear