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IDSCO1425 TypeCDS
From7145391 nt length498
To7145888 aa length165
Gene pI5.73
Definitionputative AsnC-family transcriptional regulatory protein M.W (Da)17899
NoteSC6D7.14 AseI frg.G
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6921 putative AsnC-family transcriptional regulator2775.0e-76
sgrSGR_6107 putative AsnC-family transcriptional regulator2769.0e-76
samSAM23877_1486 putative AsnC-family transcriptional regulator2895.0e-103
scabSCAB75801 putative AsnC-family transcriptional regulator2865.0e-79
saceSACE_2280 putative AsnC-family transcriptional regulator1776.0e-46
nfarnfa9830 putative transcriptional regulator1368.0e-34

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_AsnC-type1AsnC-type helix-turn-helix domain20-6160.96.9e-17

AsnC_trans_reg1Lrp/AsnC ligand binding domain86-15657.58.8e-16

HTH_241Winged helix-turn-helix DNA-binding20-6756.11.7e-15

HTH_111HTH domain25-6522.76.3e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
EFD70489.1 transcription regulator AsnC [Streptomyces lividans TK24] >emb 8534.5e-116
EFF89971.1 leucine-responsive regulatory protein [Streptomyces sp. e14] 8422.5e-114
EFL42494.1 leucine-responsive regulatory protein [Streptomyces griseoflavus ... 8213.5e-111
EOY46437.1 Leucine-responsive regulatory protein [Streptomyces lividans 1326... 8197.2e-111
GHD24995.1 AsnC family transcriptional regulator [Streptomyces violarus] 8183.3e-110
EFL30786.1 transcription regulator AsnC [Streptomyces viridochromogenes DSM ... 8153.8e-110
CAJ90370.1 putative AsnC-family transcriptional regulator [Streptomyces amb... 8145.2e-110
GAP46834.1 AsnC-family transcriptional regulator [Streptomyces azureus] 8136.7e-110
EDY59552.1 AsnC-family transcriptional regulatory protein [Streptomyces svic... 8136.9e-110
GHE62816.1 AsnC family transcriptional regulator [Streptomyces spiralis] 8131.4e-109

PSORT result

LocalizationCertaintyPSORT said
Not Clear