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IDSCO1490 TypeCDS
From7073992 nt length429
To7074420 aa length142
Gene pI4.71
Definitionputative NusB-family protein M.W (Da)16190
NoteSC9C5.14c AseI frg.L
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6860 putative transcription termination protein2461.0e-66
sgrSGR_6044 putative NusB-family protein2299.0e-62
samSAM23877_1542 N utilization substance protein B-like protein2757.0e-98
scabSCAB75161 putative transcription termination protein2669.0e-73
saceSACE_2076 NusB antitermination factor1305.0e-32
nfarnfa36310 putative transcription termination factor1113.0e-26

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

NusB1NusB family6-132113.76.6e-33

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003977336.1 MULTISPECIES: transcription antitermination factor NusB [Str... 7357.9e-99
WP_115741154.1 transcription antitermination factor NusB [Streptomyces sp. ... 7297.8e-98
WP_189746852.1 transcription antitermination factor NusB [Streptomyces tend... 7253.1e-97
WP_226028894.1 transcription antitermination factor NusB [Streptomyces hyde... 7235.4e-97
WP_121702350.1 MULTISPECIES: transcription antitermination factor NusB [unc... 7229.7e-97
WP_104636279.1 transcription antitermination factor NusB [Streptomyces sp. ... 7201.5e-96
WP_159325240.1 MULTISPECIES: transcription antitermination factor NusB [Str... 7202.1e-96
WP_087810361.1 transcription antitermination factor NusB [Streptomyces sp. ... 7192.8e-96
WP_059299522.1 MULTISPECIES: transcription antitermination factor NusB [Str... 7183.9e-96
WP_030185069.1 transcription antitermination factor NusB [Streptomyces viol... 7159.6e-96

PSORT result

LocalizationCertaintyPSORT said
Not Clear