-- | --

IDSCO1505 TypeCDS
From7057918 nt length615
To7058532 aa length204
GenerspD pI10.72
Definition30S ribosomal protein S4 M.W (Da)23579
NoteSC9C5.29c AseI frg.L
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6847 putative ribosomal protein S43314.0e-92
sgrSGR_6030 putative 30S ribosomal protein S43692.0e-103
samSAM23877_1557 30S ribosomal protein S44111.0e-149
scabSCAB75031 putative ribosomal protein S43821.0e-107
saceSACE_6804 30S ribosomal protein S41315.0e-32
nfarnfa8360 putative ribosomal protein S41391.0e-34

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Ribosomal_S41Ribosomal protein S4/S9 N-terminal domain6-9167.31.6e-18

S41S4 domain92-13965.62.2e-18

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003977321.1 MULTISPECIES: 30S ribosomal protein S4 [Streptomyces] >sp 10621.2e-146
WP_202492878.1 MULTISPECIES: 30S ribosomal protein S4 [Streptomyces] 10612.8e-146
WP_031035730.1 MULTISPECIES: 30S ribosomal protein S4 [Streptomyces] >gb 10584.9e-146
QTD73451.1 30S ribosomal protein S4 [Streptomyces lividans TK24] [Streptomyc... 10577.0e-146
WP_167469726.1 30S ribosomal protein S4 [Streptomyces rubrogriseus] 10589.2e-146
WP_030185023.1 MULTISPECIES: 30S ribosomal protein S4 [Streptomyces] >gb 10561.0e-145
WP_217166033.1 30S ribosomal protein S4 [Streptomyces sp. AC512_CC834] 10561.0e-145
WP_203712839.1 30S ribosomal protein S4 [Streptomyces diastaticus] 10581.1e-145
WP_207628061.1 30S ribosomal protein S4 [Streptomyces sp. KO7888] 10571.8e-145
WP_007447552.1 MULTISPECIES: 30S ribosomal protein S4 [Streptomyces] >gb 10524.2e-145

PSORT result

LocalizationCertaintyPSORT said
Not Clear