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IDSCO1538 TypeCDS
From7019615 nt length987
To7020601 aa length328
Gene pI8.91
Definitionputative transport system inner membrane protein M.W (Da)36243
NoteSCL2.28c AseI frg.L
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6813 putative multiple sugar ABC transporter permease protein4583.0e-130
samSAM23877_1590 putative ABC transporter permease protein YesP5720.0e+00
scabSCAB74651 putative ABC transporter permease protein5506.0e-158

*avm, Streptomyces avermitilis; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_11Binding-protein-dependent transport system inner membrane component116-31865.25.5e-18

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
MYU41060.1 ABC transporter permease subunit [Streptomyces sp. SID7813] >gb 14200.0e+00
WP_161269995.1 MULTISPECIES: sugar ABC transporter permease [Streptomyces] ... 14180.0e+00
14150.0e+00
WP_168715245.1 sugar ABC transporter permease [Streptomyces sp. LRa12] 14130.0e+00
EOY46554.1 putative rhamnose oligosaccharide ABC transport system, permease ... 14090.0e+00
WP_030871104.1 MULTISPECIES: sugar ABC transporter permease [Streptomyces] ... 14070.0e+00
MYS78425.1 ABC transporter permease subunit [Streptomyces sp. SID5926] 14060.0e+00
WP_174855172.1 sugar ABC transporter permease [Streptomyces rubrogriseus] 14040.0e+00
MZE42994.1 ABC transporter permease subunit [Streptomyces sp. SID5477] 14040.0e+00
WP_042825792.1 MULTISPECIES: sugar ABC transporter permease [Streptomyces] 14010.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear