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IDSCO1552 TypeCDS
From7006037 nt length819
To7006855 aa length272
Gene pI6.25
Definitionputative rRNA methylase M.W (Da)28935
NoteSCL11.08c AseI frg.L
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6797 putative rRNA methylase3984.0e-112
sgrSGR_5985 putative rRNA methylase4183.0e-118
samSAM23877_1606 putative enzyme4637.0e-168
scabSCAB74481 putative rRNA methylase4314.0e-122
saceSACE_0626 hypothetical tRNA/rRNA methyltransferase Rv08812019.0e-53
nfarnfa6510 putative ribosomal RNA methyltransferase1992.0e-52

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SpoU_methylase1SpoU rRNA Methylase family121-263114.83.1e-33

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003977273.1 MULTISPECIES: RNA methyltransferase [Streptomyces] >gb 12168.0e-168
WP_189283947.1 RNA methyltransferase [Streptomyces anthocyanicus] >dbj 12132.4e-167
WP_030871128.1 MULTISPECIES: RNA methyltransferase [Streptomyces] >lcl 12115.0e-167
WP_093455784.1 MULTISPECIES: RNA methyltransferase [unclassified Streptomyc... 12107.1e-167
WP_193485801.1 RNA methyltransferase [Streptomyces anthocyanicus] >dbj 12107.8e-167
WP_191849218.1 RNA methyltransferase [Streptomyces anthocyanicus] >dbj 12081.3e-166
WP_121710047.1 RNA methyltransferase [Streptomyces sp. E5N91] 11993.2e-165
MYS76090.1 rRNA methyltransferase [Streptomyces sp. SID5926] >gb 11961.0e-164
WP_109033726.1 RNA methyltransferase [Streptomyces rubrogriseus] 11908.4e-164
WP_104633914.1 RNA methyltransferase [Streptomyces sp. MH60] >gb 11839.7e-163

PSORT result

LocalizationCertaintyPSORT said
Not Clear