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IDSCO1619 TypeCDS
From6935623 nt length570
To6936192 aa length189
Gene pI6.97
Definitionputative regulatory protein M.W (Da)21054
NoteSCI41.02c AseI frg.I
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6718 putative regulatory protein2331.0e-62
sgrSGR_5892 putative transcriptional regulator2083.0e-55
samSAM23877_1673 Regulatory protein3404.0e-122
scabSCAB73791 putative regulatory protein2592.0e-70

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain11-7041.41.3e-10

HTH_31Helix-turn-helix16-6937.51.7e-09

Cupin_21Cupin domain116-16629.44.5e-07

Cupin_31Protein of unknown function (DUF861)119-16725.28.5e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003977207.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 7604.4e-101
WP_161381096.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 7562.2e-100
WP_030190837.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 7552.8e-100
WP_030404708.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 7544.6e-100
WP_031041570.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 7527.7e-100
WP_031087556.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 7501.7e-99
WP_164412931.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 7501.7e-99
WP_054103187.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 7501.8e-99
WP_059299641.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 7492.0e-99
WP_102930529.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 7483.0e-99

PSORT result

LocalizationCertaintyPSORT said
Not Clear