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IDSCO1620 TypeCDS
From6932634 nt length2616
To6935249 aa length871
GeneopuABC pI4.94
DefinitionopuABC glycine betaine transport system permease protein M.W (Da)94997
NoteSCI41.03c AseI frg.I
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6716 putative glycine betaine ABC transport system permease protein13690.0e+00
sgrSGR_5891 putative glycine betaine ABC transporter substrate-binding and permease component12310.0e+00
samSAM23877_1675 Glycine/betaine ABC transporter permease15020.0e+00
saceSACE_2224 glycine betaine transport system permease protein2982.0e-81

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

OpuAC2Substrate binding domain of ABC-type glycine betaine transport system338-586, 612-860412.95e-124

BPD_transp_11Binding-protein-dependent transport system inner membrane component105-27580.98.3e-23

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011027888.1 MULTISPECIES: ABC transporter permease/substrate binding pro... 40600.0e+00
WP_210984767.1 ABC transporter permease/substrate binding protein [Streptom... 40550.0e+00
WP_136207461.1 MULTISPECIES: ABC transporter permease/substrate binding pro... 40150.0e+00
WP_003977206.1 MULTISPECIES: ABC transporter permease/substrate binding pro... 40110.0e+00
MYS74958.1 ABC transporter permease subunit [Streptomyces sp. SID5926] 40050.0e+00
WP_109033678.1 ABC transporter permease/substrate binding protein [Streptom... 39910.0e+00
WP_087810254.1 ABC transporter permease/substrate binding protein [Streptom... 39680.0e+00
WP_202492903.1 MULTISPECIES: ABC transporter permease/substrate binding pro... 39670.0e+00
WP_189746670.1 ABC transporter permease/substrate binding protein [Streptom... 39490.0e+00
WP_134653220.1 ABC transporter permease/substrate binding protein [Streptom... 39480.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear