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IDSCO1621 TypeCDS
From6931547 nt length1095
To6932641 aa length364
GeneopuAA pI4.92
DefinitionopuAA glycine betaine transport ATP-binding protein M.W (Da)39939
NoteSCI41.04c AseI frg.I
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6715 putative glycine betaine ABC transport ATP-binding protein5662.0e-162
sgrSGR_5890 putative glycine betaine ABC transporter ATP-binding protein5018.0e-143
samSAM23877_1676 Glycine betaine transport ATP-binding protein6550.0e+00
saceSACE_2410 putative glycine betaine/proline ABC transporter3693.0e-103

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC_tran1ABC transporter46-192111.44.1e-32

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003977205.1 MULTISPECIES: betaine/proline/choline family ABC transporter... 15610.0e+00
WP_202492902.1 MULTISPECIES: betaine/proline/choline family ABC transporter... 15560.0e+00
WP_121711670.1 betaine/proline/choline family ABC transporter ATP-binding p... 15330.0e+00
WP_109033677.1 betaine/proline/choline family ABC transporter ATP-binding p... 15320.0e+00
WP_087810253.1 betaine/proline/choline family ABC transporter ATP-binding p... 15290.0e+00
WP_203697557.1 betaine/proline/choline family ABC transporter ATP-binding p... 15280.0e+00
WP_115741265.1 betaine/proline/choline family ABC transporter ATP-binding p... 15230.0e+00
WP_189746668.1 betaine/proline/choline family ABC transporter ATP-binding p... 15200.0e+00
WP_159325369.1 betaine/proline/choline family ABC transporter ATP-binding p... 15190.0e+00
WP_127894932.1 MULTISPECIES: betaine/proline/choline family ABC transporter... 15090.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear