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IDSCO1631 TypeCDS
From6919573 nt length2853
To6922425 aa length950
Gene pI7.82
Definitionputative helicase M.W (Da)105829
NoteSCI41.14c AseI frg.I
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6695 putative ATP-dependent RNA helicase16570.0e+00
sgrSGR_5873 putative ATP-dependent RNA helicase16250.0e+00
samSAM23877_1686 putative helicase HelY18310.0e+00
scabSCAB73621 putative ATP-dependent RNA helicase17600.0e+00
saceSACE_2265 putative ATP-dependent RNA helicase10230.0e+00
nfarnfa31620 putative ATP-dependent RNA helicase9210.0e+00

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DSHCT1DSHCT (NUC185) domain774-944128.91.3e-37

DEAD1DEAD/DEAH box helicase53-20066.91.7e-18

ResIII1Type III restriction enzyme, res subunit51-19936.44.4e-09

rRNA_proc-arch1rRNA-processing arch domain510-61130.33.3e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011027893.1 MULTISPECIES: DEAD/DEAH box helicase [Streptomyces] >gb 48110.0e+00
WP_030870821.1 MULTISPECIES: DEAD/DEAH box helicase [Streptomyces] >gb 48060.0e+00
WP_093455806.1 MULTISPECIES: DEAD/DEAH box helicase [unclassified Streptomy... 48050.0e+00
WP_121710303.1 DEAD/DEAH box helicase [Streptomyces sp. E5N91] 48020.0e+00
WP_109033669.1 DEAD/DEAH box helicase [Streptomyces rubrogriseus] >gb 47940.0e+00
MYS71928.1 DEAD/DEAH box helicase [Streptomyces sp. SID5926] 47890.0e+00
EFD70284.1 helicase [Streptomyces lividans TK24] 47750.0e+00
WP_115741273.1 DEAD/DEAH box helicase [Streptomyces sp. CB09001] >gb 47580.0e+00
WP_164460728.1 DEAD/DEAH box helicase [Streptomyces tendae] >gb 47530.0e+00
WP_159325382.1 DEAD/DEAH box helicase [Streptomyces tendae] 47530.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear