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IDSCO1699 TypeCDS
From6847400 nt length648
To6848047 aa length215
Gene pI5.68
Definitionputative transcriptional regulator M.W (Da)23123
NoteSCI30A.20c AseI frg.I
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6602 putative TetR-family transcriptional regulator3237.0e-90
sgrSGR_5801 putative TetR-family transcriptional regulator3083.0e-85
samSAM23877_1759 Transcriptional regulator%2C TetR family4021.0e-145
scabSCAB72701 putative TetR-family transcriptional regulator3492.0e-97
nfarnfa34140 putative transcriptional regulator1653.0e-42

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

TetR_N1Bacterial regulatory proteins, tetR family26-7165.62.3e-18

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003977126.1 MULTISPECIES: TetR family transcriptional regulator [Strepto... 10223.8e-140
WP_030868060.1 TetR family transcriptional regulator [Streptomyces violaceo... 10181.5e-139
WP_106518514.1 MULTISPECIES: TetR family transcriptional regulator [unclass... 10172.0e-139
WP_121710843.1 TetR family transcriptional regulator [Streptomyces sp. E5N9... 10154.5e-139
MYS53250.1 TetR family transcriptional regulator [Streptomyces sp. SID6013] 9981.8e-136
WP_115741328.1 TetR family transcriptional regulator [Streptomyces sp. CB09... 9972.4e-136
WP_102930299.1 MULTISPECIES: TetR family transcriptional regulator [Strepto... 9964.0e-136
WP_061445590.1 TetR family transcriptional regulator [Streptomyces sp. CCM_... 9921.5e-135
WP_134653201.1 TetR family transcriptional regulator [Streptomyces sp. H23] 9912.4e-135
WP_164413046.1 MULTISPECIES: TetR family transcriptional regulator [Strepto... 9902.6e-135

PSORT result

LocalizationCertaintyPSORT said
Not Clear