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IDSCO1768 TypeCDS
From6779081 nt length1116
To6780196 aa length371
Gene pI10.4
Definitionputative pseudouridine synthase M.W (Da)40795
NoteSCI51.08c AseI frg.I
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6512 putative pseudouridine synthase5501.0e-157
sgrSGR_5729 putative pseudouridine synthase4931.0e-140
samSAM23877_1826 Pseudouridine synthase6580.0e+00
scabSCAB71881 putative pseudouridine synthase5845.0e-168
saceSACE_5237 pseudouridylate synthase ribosomal large subunit2381.0e-63
nfarnfa20110 putative pseudouridine synthase2117.0e-56

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

PseudoU_synth_21RNA pseudouridylate synthase197-32784.85.9e-24

S41S4 domain135-18047.31.1e-12

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011027963.1 MULTISPECIES: rRNA pseudouridine synthase [Streptomyces] >lc... 16620.0e+00
WP_121713069.1 rRNA pseudouridine synthase [Streptomyces sp. E5N91] 16590.0e+00
WP_003977056.1 MULTISPECIES: rRNA pseudouridine synthase [Streptomyces] >gb... 16560.0e+00
WP_109033549.1 rRNA pseudouridine synthase [Streptomyces rubrogriseus] 16550.0e+00
WP_164385287.1 rRNA pseudouridine synthase [Streptomyces sp. OM5714] >lcl 16550.0e+00
WP_165686423.1 rRNA pseudouridine synthase [Streptomyces sp. KO7888] >gb 16540.0e+00
WP_007448006.1 MULTISPECIES: rRNA pseudouridine synthase [Streptomyces] >gb... 16540.0e+00
WP_087791707.1 rRNA pseudouridine synthase [Streptomyces sp. CS159] >gb 16540.0e+00
WP_189746463.1 rRNA pseudouridine synthase [Streptomyces tendae] >dbj 16500.0e+00
WP_073731048.1 MULTISPECIES: rRNA pseudouridine synthase [Streptomyces] >gb... 16500.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear