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IDSCO1840 TypeCDS
From6698116 nt length1599
To6699714 aa length532
Gene pI6.23
Definitionputative ABC transporter ATP binding protein M.W (Da)57887
NoteSCI8.25c AseI frg.I
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6426 putative ABC transporter ATP-binding protein9380.0e+00
sgrSGR_5653 putative ABC transporter ATP-binding protein9740.0e+00
samSAM23877_1911 putative ABC transporter ATP binding protein10570.0e+00
scabSCAB70961 putative ABC transporter ATP-binding protein10010.0e+00
saceSACE_2187 ABC transporter, ATP-binding protein6770.0e+00
nfarnfa34880 putative ABC transporter ATP-binding protein6580.0e+00

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC_tran2ABC transporter19-187, 342-471178.86.5e-53

AAA_211AAA domain, putative AbiEii toxin, Type IV TA system423-49876.72.4e-21

ABC_tran_Xtn1ABC transporter230-31027.81.8e-06

DLIC1Dynein light intermediate chain (DLIC)349-38420.20.0002

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003976982.1 MULTISPECIES: ATP-binding cassette domain-containing protein... 25900.0e+00
WP_202492941.1 MULTISPECIES: ATP-binding cassette domain-containing protein... 25830.0e+00
WP_109032035.1 ATP-binding cassette domain-containing protein [Streptomyces... 25830.0e+00
WP_203697105.1 ATP-binding cassette domain-containing protein [Streptomyces... 25770.0e+00
WP_115741453.1 ATP-binding cassette domain-containing protein [Streptomyces... 25690.0e+00
WP_053128674.1 ATP-binding cassette domain-containing protein [Streptomyces... 25640.0e+00
WP_055416251.1 ATP-binding cassette domain-containing protein [Streptomyces... 25580.0e+00
WP_007448111.1 MULTISPECIES: ATP-binding cassette domain-containing protein... 25550.0e+00
WP_054101575.1 ATP-binding cassette domain-containing protein [Streptomyces... 25540.0e+00
WP_059301869.1 MULTISPECIES: ATP-binding cassette domain-containing protein... 25500.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear