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IDSCO1886 TypeCDS
From6646447 nt length897
To6647343 aa length298
Gene pI9.96
Definitionputative integral membrane transport protein M.W (Da)32450
NoteSCI7.04c AseI frg.I
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6369 putative multiple sugar ABC transporter permease protein4332.0e-122
sgrSGR_211 putative ABC transporter permease protein4353.0e-123
samSAM23877_1961 Integral membrane transporter5040.0e+00
scabSCAB70471 putative multiple sugar ABC transporter permease protein4779.0e-136

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_11Binding-protein-dependent transport system inner membrane component111-28762.92.8e-17

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003976934.1 MULTISPECIES: carbohydrate ABC transporter permease [Strepto... 11637.9e-159
WP_202492951.1 MULTISPECIES: carbohydrate ABC transporter permease [Strepto... 11649.9e-159
WP_109031996.1 carbohydrate ABC transporter permease [Streptomyces rubrogri... 11611.5e-158
WP_203696860.1 carbohydrate ABC transporter permease [Streptomyces rubrogri... 11621.9e-158
WP_115741492.1 carbohydrate ABC transporter permease [Streptomyces sp. CB09... 11532.4e-157
WP_164385217.1 carbohydrate ABC transporter permease [Streptomyces sp. OM57... 11522.9e-157
WP_207629346.1 carbohydrate ABC transporter permease [Streptomyces sp. KO78... 11543.1e-157
WP_153180461.1 carbohydrate ABC transporter permease [Streptomyces sp. SYP-... 11471.7e-156
WP_102927760.1 MULTISPECIES: carbohydrate ABC transporter permease [Strepto... 11438.7e-156
KPC74188.1 transporter [Streptomyces sp. NRRL WC-3753] 11439.1e-156

PSORT result

LocalizationCertaintyPSORT said
Not Clear