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IDSCO1890 TypeCDS
From6642093 nt length669
To6642761 aa length222
Gene pI5.42
Definitionputative transcriptional regulator M.W (Da)24237
NoteSCI7.08c AseI frg.I
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6365 putative GntR-family transcriptional regulator3361.0e-93
sgrSGR_207 putative GntR-family transcriptional regulator3222.0e-89
samSAM23877_1965 Transcriptional regulator3858.0e-139
scabSCAB70431 putative GntR-family transcriptional regulator3461.0e-96

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

FCD1FCD domain83-20183.02e-23

GntR1Bacterial regulatory proteins, gntR family14-7365.03.2e-18

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011028033.1 MULTISPECIES: GntR family transcriptional regulator [Strepto... 8431.1e-112
WP_109031992.1 GntR family transcriptional regulator [Streptomyces rubrogri... 8352.2e-111
WP_115741496.1 GntR family transcriptional regulator [Streptomyces sp. CB09... 8291.6e-110
WP_054101607.1 MULTISPECIES: GntR family transcriptional regulator [Strepto... 8273.5e-110
EFD70018.1 transcriptional regulator [Streptomyces lividans TK24] >gb 8231.1e-109
WP_159326512.1 GntR family transcriptional regulator [Streptomyces tendae] ... 8231.7e-109
WP_030403802.1 MULTISPECIES: GntR family transcriptional regulator [Strepto... 8221.7e-109
WP_108989679.1 GntR family transcriptional regulator [Streptomyces coelicof... 8221.9e-109
WP_061445425.1 MULTISPECIES: GntR family transcriptional regulator [Strepto... 8212.5e-109
WP_127893774.1 MULTISPECIES: GntR family transcriptional regulator [Strepto... 8212.5e-109

PSORT result

LocalizationCertaintyPSORT said
Not Clear