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IDSCO1900 TypeCDS
From6632836 nt length879
To6631958 aa length292
Gene pI9.8
Definitionputative integral membrane sugar transport protein M.W (Da)30907
NoteSCI7.18 AseI frg.I
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6355 putative multiple sugar ABC transporter permease protein4161.0e-117
sgrSGR_438 putative ABC transporter permease protein3709.0e-104
samSAM23877_1974 putative integral membrane sugar transport protein5250.0e+00
scabSCAB70341 putative ABC transporter permease protein4784.0e-136
saceSACE_4160 ABC sugar transporter, permease component2262.0e-60

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_11Binding-protein-dependent transport system inner membrane component105-27250.71.6e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011028038.1 MULTISPECIES: carbohydrate ABC transporter permease [Strepto... 12737.1e-176
WP_203722649.1 carbohydrate ABC transporter permease [Streptomyces coelicof... 12739.3e-176
WP_136208452.1 carbohydrate ABC transporter permease [Streptomyces sp. LRa1... 12721.2e-175
WP_109031984.1 MULTISPECIES: carbohydrate ABC transporter permease [Strepto... 12721.3e-175
WP_125632722.1 MULTISPECIES: carbohydrate ABC transporter permease [unclass... 12702.0e-175
WP_134652582.1 carbohydrate ABC transporter permease [Streptomyces sp. H23] 12692.8e-175
WP_059301818.1 MULTISPECIES: carbohydrate ABC transporter permease [Strepto... 12692.9e-175
WP_102927747.1 carbohydrate ABC transporter permease [Streptomyces diastati... 12693.2e-175
WP_212729865.1 ABC transporter permease subunit [Streptomyces sp. V17-9] >g... 12685.3e-175
WP_061445417.1 carbohydrate ABC transporter permease [Streptomyces sp. CCM_... 12676.2e-175

PSORT result

LocalizationCertaintyPSORT said
Not Clear