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IDSCO1929 TypeCDS
From6606419 nt length810
To6605610 aa length269
Gene pI6.53
Definitionputative integral membrane transport protein M.W (Da)27473
NoteSCC22.11 AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6321 putative ABC transporter permease protein3371.0e-93
sgrSGR_5592 putative ABC transporter permease protein3777.0e-106
samSAM23877_2000 Integral membrane transporter4052.0e-145
scabSCAB69991 putative ABC transporter permease protein3792.0e-106
saceSACE_2170 putative ABC-2 type transport system permease protein1202.0e-28
nfarnfa35660 putative ABC transporter membrane protein1492.0e-37

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC2_membrane1ABC-2 type transporter42-23682.32.7e-23

ABC2_membrane_31ABC-2 family transporter protein74-26276.61.7e-21

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003976890.1 MULTISPECIES: ABC transporter permease [Streptomyces] >gb 8754.8e-116
WP_136209152.1 ABC transporter permease [Streptomyces sp. LRa12] >lcl 8749.1e-116
WP_093455876.1 MULTISPECIES: ABC transporter permease [unclassified Strepto... 8731.2e-115
WP_121714662.1 ABC transporter permease [Streptomyces sp. E5N91] 8731.3e-115
WP_191851450.1 ABC transporter permease [Streptomyces anthocyanicus] >dbj 8721.4e-115
WP_189284558.1 ABC transporter permease [Streptomyces anthocyanicus] >dbj 8721.5e-115
WP_030868573.1 ABC transporter permease [Streptomyces violaceoruber] 8721.8e-115
WP_121704188.1 ABC transporter permease [Streptomyces sp. E5N298] 8712.1e-115
WP_115741528.1 ABC transporter permease [Streptomyces sp. CB09001] >gb 8703.1e-115
WP_210977935.1 ABC transporter permease [Streptomyces sp. RM72] >lcl 8694.4e-115

PSORT result

LocalizationCertaintyPSORT said
Not Clear