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IDSCO1979 TypeCDS
From6548742 nt length861
To6549602 aa length286
Gene pI7.19
Definitionputative DNA-binding protein M.W (Da)32246
NoteSC3C9.14c AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6253 putative DNA-binding protein4892.0e-139
sgrSGR_1055 putative DNA-binding protein4639.0e-132
samSAM23877_2058 DNA-binding protein5630.0e+00
scabSCAB69261 putative DNA-binding protein5077.0e-145

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain15-7538.31.1e-09

HTH_31Helix-turn-helix21-6930.23.1e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003976840.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 14790.0e+00
WP_059300260.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 14740.0e+00
WP_104634899.1 Scr1 family TA system antitoxin-like transcriptional regulat... 14730.0e+00
WP_226024250.1 helix-turn-helix transcriptional regulator [Streptomyces hyd... 14700.0e+00
WP_087809939.1 Scr1 family TA system antitoxin-like transcriptional regulat... 14690.0e+00
WP_127894135.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 14680.0e+00
MZG16037.1 helix-turn-helix domain-containing protein [Streptomyces sp. SID5... 14660.0e+00
WP_167307666.1 Scr1 family TA system antitoxin-like transcriptional regulat... 14620.0e+00
WP_030185875.1 Scr1 family TA system antitoxin-like transcriptional regulat... 14610.0e+00
WP_122615049.1 Scr1 family TA system antitoxin-like transcriptional regulat... 14600.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear