-- | --

IDSCO2070 TypeCDS
From6446627 nt length1149
To6445479 aa length382
Gene pI10.14
Definitionputative membrane protein M.W (Da)41949
NoteSC4A10.03 AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6137 putative membrane protein4985.0e-142
sgrSGR_5435 putative membrane protein4901.0e-139
samSAM23877_2159 conserved membrane protein of unknown function6100.0e+00
scabSCAB68161 putative membrane protein4884.0e-139
nfarnfa20220 putative membrane protein3253.0e-90

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

MS_channel1Mechanosensitive ion channel135-324111.24.4e-32

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_189283761.1 mechanosensitive ion channel [Streptomyces anthocyanicus] >d... 17030.0e+00
WP_003976745.1 MULTISPECIES: mechanosensitive ion channel [Streptomyces] >g... 16990.0e+00
WP_164270308.1 mechanosensitive ion channel [Streptomyces rubrogriseus] >gb... 16650.0e+00
WP_109031839.1 mechanosensitive ion channel [Streptomyces rubrogriseus] 16610.0e+00
WP_189748896.1 mechanosensitive ion channel [Streptomyces tendae] >dbj 16540.0e+00
WP_159326660.1 mechanosensitive ion channel [Streptomyces tendae] 16530.0e+00
WP_210915466.1 MULTISPECIES: mechanosensitive ion channel family protein [u... 16410.0e+00
WP_164458423.1 mechanosensitive ion channel [Streptomyces tendae] >gb 16390.0e+00
WP_161380261.1 mechanosensitive ion channel [Streptomyces sp. SID5914] >gb 16330.0e+00
WP_087809859.1 mechanosensitive ion channel [Streptomyces sp. CS113] >gb 16300.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear