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IDSCO2213 TypeCDS
From6290832 nt length582
To6290251 aa length193
Gene pI10.13
Definitionputative regulatory protein M.W (Da)21295
NoteSC10B7.08 AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5994 putative regulatory protein2415.0e-65
sgrSGR_5301 putative transcriptional regulator2422.0e-65
samSAM23877_2302 Regulatory protein2791.0e-97
scabSCAB66781 putative regulatory protein2592.0e-70

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Trans_reg_C1Transcriptional regulatory protein, C terminal113-18685.02.5e-24

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011028201.1 MULTISPECIES: winged helix-turn-helix domain-containing prot... 7598.3e-101
WP_003976602.1 MULTISPECIES: winged helix-turn-helix domain-containing prot... 7545.2e-100
WP_093455946.1 MULTISPECIES: winged helix-turn-helix domain-containing prot... 7354.8e-97
WP_109031741.1 winged helix-turn-helix domain-containing protein [Streptomy... 7311.6e-96
MYS71564.1 winged helix family transcriptional regulator [Streptomyces sp. S... 7277.5e-96
WP_104630862.1 winged helix-turn-helix domain-containing protein [Streptomy... 6712.2e-87
WP_059303000.1 winged helix-turn-helix domain-containing protein [Streptomy... 6703.4e-87
WP_108934453.1 winged helix-turn-helix domain-containing protein [Streptomy... 6661.3e-86
WP_164413643.1 MULTISPECIES: winged helix-turn-helix domain-containing prot... 6633.3e-86
WP_076974026.1 winged helix-turn-helix domain-containing protein [Streptomy... 6625.0e-86

PSORT result

LocalizationCertaintyPSORT said
Not Clear