-- | --

IDSCO2257 TypeCDS
From6243215 nt length1098
To6242118 aa length365
Gene pI5.05
Definitionprobable ABC transporter ATP-binding component. M.W (Da)39215
NoteSCC75A.03 AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5941 putative ABC transporter ATP-binding protein4892.0e-139
sgrSGR_5252 putative ABC transporter ATP-binding protein4954.0e-141
samSAM23877_2336 Daunorubicin/doxorubicin resistance ATP-binding protein DrrA6190.0e+00
scabSCAB66371 putative ABC transporter ATP-binding protein5513.0e-158
saceSACE_4277 probable ABC transporter, ATP-binding component3323.0e-92

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC_tran1ABC transporter52-19598.73.5e-28

AAA_211AAA domain, putative AbiEii toxin, Type IV TA system127-22550.81.9e-13

DUF41621Domain of unknown function (DUF4162)249-34131.81.6e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
MYU41783.1 ATP-binding cassette domain-containing protein [Streptomyces sp. ... 18600.0e+00
EOY47299.1 putative ABC transporter ATP-binding component [Streptomyces livi... 18550.0e+00
MYS76461.1 ATP-binding cassette domain-containing protein [Streptomyces sp. ... 18220.0e+00
MYS48989.1 ATP-binding cassette domain-containing protein [Streptomyces sp. ... 17860.0e+00
GHA35159.1 daunorubicin resistance protein DrrA family ABC transporter ATP-... 17850.0e+00
GGL44425.1 daunorubicin resistance protein DrrA family ABC transporter ATP-... 17810.0e+00
AXL88308.1 daunorubicin/doxorubicin resistance ABC transporter ATP-binding p... 17780.0e+00
OWA07973.1 daunorubicin/doxorubicin resistance ABC transporter ATP-binding p... 17680.0e+00
17650.0e+00
QFX84291.1 ATP-binding cassette domain-containing protein [Streptomyces sp. ... 17560.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear