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IDSCO2426 TypeCDS
From6067190 nt length1212
To6065979 aa length403
Gene pI6.08
Definitionpossible regulatory protein M.W (Da)44658
NoteSCC42.07 AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5740 putative regulatory protein2011.0e-52
sgrSGR_1045 putative transcriptional regulator4392.0e-124
samSAM23877_7159 putative regulatory protein5450.0e+00
scabSCAB63711 putative regulatory protein2041.0e-53
saceSACE_2350 regulatory protein2462.0e-66

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_301PucR C-terminal helix-turn-helix domain335-39245.44.6e-12

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
MYS71210.1 PucR family transcriptional regulator [Streptomyces sp. SID5926] 16600.0e+00
WP_003976380.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 16580.0e+00
WP_109031564.1 helix-turn-helix domain-containing protein [Streptomyces rub... 16510.0e+00
WP_115741943.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 16400.0e+00
WP_059299231.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 16230.0e+00
WP_030181185.1 PucR family transcriptional regulator [Streptomyces violaceo... 16200.0e+00
WP_087809530.1 PucR family transcriptional regulator [Streptomyces sp. CS11... 16150.0e+00
WP_159327414.1 helix-turn-helix domain-containing protein [Streptomyces ten... 16090.0e+00
WP_127894866.1 MULTISPECIES: PucR family transcriptional regulator [Strepto... 16070.0e+00
WP_104635253.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 16040.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear