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IDSCO2440 TypeCDS
From6048088 nt length774
To6048861 aa length257
Gene pI6.68
Definitionputative transcriptional regulator M.W (Da)27697
NoteSCC24.11c AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5741 putative IclR-family transcriptional regulator4015.0e-113
samSAM23877_2497 Transcriptional regulator4861.0e-177
scabSCAB63721 putative IclR-family transcriptional regulator4575.0e-130
saceSACE_3534 IclR-family transcriptional regulator2601.0e-70
nfarnfa30410 putative transcriptional regulator1193.0e-28

*avm, Streptomyces avermitilis; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

IclR1Bacterial transcriptional regulator124-248122.58.3e-36

HTH_IclR1IclR helix-turn-helix domain7-5448.64.6e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003976366.1 MULTISPECIES: IclR family transcriptional regulator [Strepto... 12405.6e-172
WP_007449320.1 MULTISPECIES: IclR family transcriptional regulator [Strepto... 12344.7e-171
WP_054100581.1 MULTISPECIES: IclR family transcriptional regulator [Strepto... 12311.2e-170
WP_121709374.1 IclR family transcriptional regulator [Streptomyces sp. E5N9... 12292.9e-170
MYS74933.1 helix-turn-helix domain-containing protein [Streptomyces sp. SID5... 12293.1e-170
WP_164244063.1 IclR family transcriptional regulator [Streptomyces coelicof... 12283.7e-170
WP_127896400.1 MULTISPECIES: IclR family transcriptional regulator [Strepto... 12283.8e-170
WP_052842408.1 MULTISPECIES: IclR family transcriptional regulator [Strepto... 12284.1e-170
WP_125631872.1 IclR family transcriptional regulator [Streptomyces sp. KPB2... 12275.3e-170
WP_030181161.1 IclR family transcriptional regulator [Streptomyces violaceo... 12251.1e-169

PSORT result

LocalizationCertaintyPSORT said
Not Clear