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IDSCO2452 TypeCDS
From6029376 nt length1428
To6027949 aa length475
Gene pI5.57
Definitionputative two-component sensor histidine kinase M.W (Da)50377
NoteSCC24.23 AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5719 putative two-component system sensor kinase4726.0e-134
sgrSGR_5093 putative two-component system sensor kinase4718.0e-134
samSAM23877_2511 Two-component sensor histidine kinase6270.0e+00

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

GAF1GAF domain155-28565.18e-18

GAF_21GAF domain153-28557.91.2e-15

HisKA_31Histidine kinase303-36549.83.3e-13

GAF_31GAF domain155-28546.15.2e-12

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011028361.1 MULTISPECIES: GAF domain-containing protein [Streptomyces] >... 17120.0e+00
WP_003976352.1 MULTISPECIES: GAF domain-containing protein [Streptomyces] >... 17100.0e+00
WP_106518103.1 GAF domain-containing protein [Streptomyces sp. 111WW2] >gb 17080.0e+00
WP_193485079.1 GAF domain-containing protein [Streptomyces anthocyanicus] >... 17080.0e+00
WP_121712157.1 GAF domain-containing protein [Streptomyces sp. E5N91] 17060.0e+00
WP_191849382.1 GAF domain-containing protein [Streptomyces anthocyanicus] >... 17050.0e+00
WP_093456103.1 MULTISPECIES: GAF domain-containing protein [unclassified St... 17050.0e+00
WP_189282948.1 GAF domain-containing protein [Streptomyces anthocyanicus] >... 17040.0e+00
WP_109031540.1 GAF domain-containing protein [Streptomyces rubrogriseus] 16390.0e+00
WP_115741965.1 GAF domain-containing protein [Streptomyces sp. CB09001] >gb... 16160.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear