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IDSCO2464 TypeCDS
From6016405 nt length1929
To6014477 aa length642
Gene pI5.43
Definitionputative ABC transporter M.W (Da)69444
NoteSC7A8.03 AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5680 putative ABC transporter ATP-binding protein10810.0e+00
sgrSGR_5068 putative ABC transporter ATPase and permease component10220.0e+00
samSAM23877_2517 conserved membrane protein of unknown function12000.0e+00
scabSCAB62511 putative ABC transporter ATP-binding protein11020.0e+00
saceSACE_0056 putative ABC transporter ATP-binding protein2958.0e-81
nfarnfa2640 putative ABC transporter7280.0e+00

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC_membrane1ABC transporter transmembrane region40-351193.55e-57

ABC_tran1ABC transporter414-563107.37.8e-31

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003976340.1 MULTISPECIES: ABC transporter ATP-binding protein/permease [... 30870.0e+00
WP_136208608.1 ABC transporter ATP-binding protein/permease [Streptomyces s... 30800.0e+00
WP_210983794.1 ATP-binding cassette domain-containing protein [Streptomyces... 30780.0e+00
WP_121712145.1 ABC transporter ATP-binding protein/permease [Streptomyces s... 30760.0e+00
WP_164275138.1 ABC transporter ATP-binding protein/permease [Streptomyces r... 30590.0e+00
WP_189741477.1 ABC transporter ATP-binding protein/permease [Streptomyces t... 30560.0e+00
MYS69094.1 ATP-binding cassette domain-containing protein [Streptomyces sp. ... 30550.0e+00
WP_109033042.1 ABC transporter ATP-binding protein/permease [Streptomyces r... 30540.0e+00
WP_164458242.1 ABC transporter ATP-binding protein/permease [Streptomyces t... 30450.0e+00
WP_115741969.1 ABC transporter ATP-binding protein/permease [Streptomyces s... 30440.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear