-- | --

IDSCO2468 TypeCDS
From6009452 nt length1926
To6011377 aa length641
GenednaG pI6.34
DefinitionDNA primase M.W (Da)69712
NoteSC7A8.07c AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5676 putative DNA primase10780.0e+00
sgrSGR_5066 putative DNA primase9750.0e+00
samSAM23877_2521 DNA primase12170.0e+00
scabSCAB62491 putative DNA primase11320.0e+00
saceSACE_1506 DNA primase (bacterial type)5685.0e-163
nfarnfa14700 putative DNA primase5301.0e-151

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Toprim_N1DNA primase catalytic core, N-terminal domain127-254124.42.6e-36

zf-CHC21CHC2 zinc finger6-101112.65.2e-33

Toprim_41Toprim domain263-33360.41.7e-16

DnaB_bind1DnaB-helicase binding domain of primase374-42757.51.1e-15

DnaG_DnaB_bind1DNA primase DnaG DnaB-binding488-60852.85.1e-14

Toprim_21Toprim-like265-35342.84.9e-11

Toprim1Toprim domain264-33127.23e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003976336.1 MULTISPECIES: DNA primase [Streptomyces] >sp 31010.0e+00
WP_093456107.1 MULTISPECIES: DNA primase [unclassified Streptomyces] >gb 30960.0e+00
WP_109033040.1 DNA primase [Streptomyces rubrogriseus] >gb 30950.0e+00
WP_016326156.1 DNA primase [Streptomyces lividans] >gb 30930.0e+00
WP_193485071.1 DNA primase [Streptomyces anthocyanicus] 30930.0e+00
WP_127894679.1 DNA primase [Streptomyces sp. S10(2018)] >gb 30840.0e+00
NDZ70675.1 DNA primase [Streptomyces sp. SID10362] 30840.0e+00
WP_102931592.1 MULTISPECIES: DNA primase [Streptomyces] >gb 30810.0e+00
WP_206209438.1 DNA primase [Streptomyces sp. SID10362] 30800.0e+00
WP_159327370.1 DNA primase [Streptomyces tendae] 30800.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear