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IDSCO2564 TypeCDS
From5899230 nt length1011
To5900240 aa length336
Gene pI6.15
Definitionputative DNA-binding protein M.W (Da)35079
NoteSCC123.02c AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5558 putative DNA polymerase III delta subunit4648.0e-132
sgrSGR_4982 putative DNA-binding protein5208.0e-149
samSAM23877_2610 putative DNA-binding protein5990.0e+00
scabSCAB61441 putative DNA polymerase III delta subunit5613.0e-161
saceSACE_1438 DNA polymerase III delta subunit2132.0e-56
nfarnfa13940 hypothetical protein2101.0e-55

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DNA_pol3_delta1DNA polymerase III, delta subunit23-18642.84.2e-11

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
EFD69328.1 DNA polymerase III, delta subunit [Streptomyces lividans TK24] >g... 14050.0e+00
AXL88573.1 DNA polymerase III subunit delta [Streptomyces sp. CB09001] 13890.0e+00
GHB98493.1 DNA-binding protein [Streptomyces anthocyanicus] 13880.0e+00
AIJ15888.1 DNA-binding protein [Streptomyces lividans TK24] >gb 13880.0e+00
RSN39984.1 DNA polymerase III subunit delta [Streptomyces sp. WAC 04229] 13850.0e+00
MZE71622.1 DNA polymerase III subunit delta [Streptomyces sp. SID5789] 13830.0e+00
OWA04526.1 DNA polymerase III subunit delta [Streptomyces sp. CS113] 13820.0e+00
PVD10492.1 DNA polymerase III subunit delta [Streptomyces sp. CS207] >gb 13810.0e+00
GHA67059.1 DNA-binding protein [Streptomyces tendae] 13800.0e+00
OMI88980.1 DNA polymerase III subunit delta [Streptomyces sp. M1013] 13750.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear