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IDSCO2793 TypeCDS
From5618835 nt length603
To5618233 aa length200
GeneornA pI4.66
DefinitionornA oligoribonuclease M.W (Da)22022
Note2SCC13.01 AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5260 putative 3'->5' exoribonuclease3582.0e-100
sgrSGR_4741 oligoribonuclease3613.0e-101
samSAM23877_2830 Oligoribonuclease3998.0e-145
scabSCAB57821 putative 3'->5' exoribonuclease3774.0e-106
saceSACE_1292 oligoribonuclease (3'->5' exoribonuclease)2253.0e-60
nfarnfa12870 putative oligoribonuclease2261.0e-60

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

RNase_T1Exonuclease6-16888.08.9e-25

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003976007.1 MULTISPECIES: oligoribonuclease [Streptomyces] >sp 10506.9e-145
GGL28288.1 oligoribonuclease [Streptomyces anthocyanicus] 10509.0e-145
WP_059300531.1 MULTISPECIES: oligoribonuclease [Streptomyces] >gb 10472.2e-144
WP_030179898.1 oligoribonuclease [Streptomyces violaceorubidus] 10472.2e-144
WP_093456209.1 MULTISPECIES: oligoribonuclease [Streptomyces] >lcl 10445.3e-144
GHA46655.1 oligoribonuclease [Streptomyces anthocyanicus] >dbj 10447.1e-144
WP_159327801.1 oligoribonuclease [Streptomyces tendae] 10393.4e-143
WP_115742257.1 oligoribonuclease [Streptomyces sp. CB09001] >gb 10393.6e-143
WP_102929449.1 MULTISPECIES: oligoribonuclease [Streptomyces] >gb 10351.3e-142
WP_031084170.1 MULTISPECIES: oligoribonuclease [Streptomyces] >gb 10342.1e-142

PSORT result

LocalizationCertaintyPSORT said
Not Clear