-- | --

IDSCO2830 TypeCDS
From5578136 nt length651
To5577486 aa length216
Gene pI9.42
Definitionprobable amino acid ABC transporter protein integral membrane component. M.W (Da)24311
NoteSCE20.04 AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5228 putative polar amino acid ABC transporter permease protein2746.0e-75
sgrSGR_4711 putative amino acid ABC transporter permease protein2145.0e-57
samSAM23877_2877 putative amino-acid ABC transporter permease protein y4tG4105.0e-149
scabSCAB57441 putative polar amino acid ABC transporter permease protein3107.0e-86
saceSACE_6267 amino acid ABC transporter, permease protein2023.0e-53

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_11Binding-protein-dependent transport system inner membrane component35-21573.02.2e-20

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003975970.1 MULTISPECIES: ectoine/hydroxyectoine ABC transporter permeas... 8898.8e-120
WP_115742310.1 ectoine/hydroxyectoine ABC transporter permease subunit EhuD... 8871.4e-119
WP_007449893.1 MULTISPECIES: ectoine/hydroxyectoine ABC transporter permeas... 8844.0e-119
WP_164410902.1 ectoine/hydroxyectoine ABC transporter permease subunit EhuD... 8821.1e-118
WP_226024704.1 ectoine/hydroxyectoine ABC transporter permease subunit EhuD... 8811.6e-118
WP_087809157.1 ectoine/hydroxyectoine ABC transporter permease subunit EhuD... 8801.6e-118
WP_104632191.1 ectoine/hydroxyectoine ABC transporter permease subunit EhuD... 8801.8e-118
WP_127894939.1 MULTISPECIES: ectoine/hydroxyectoine ABC transporter permeas... 8792.4e-118
WP_031040884.1 ectoine/hydroxyectoine ABC transporter permease subunit EhuD... 8793.1e-118
WP_159327755.1 ectoine/hydroxyectoine ABC transporter permease subunit EhuD... 8783.5e-118

PSORT result

LocalizationCertaintyPSORT said
Not Clear