-- | --

IDSCO2869 TypeCDS
From5543091 nt length846
To5542246 aa length281
Gene pI7.15
Definitionputative regulatory protein M.W (Da)31300
NoteSCE6.06 AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5197 putative DNA-binding protein2502.0e-67
sgrSGR_7135t putative DNA-binding protein1855.0e-48
scabSCAB16241 putative DNA-binding protein2886.0e-79
nfarnfa38930 putative DNA-binding protein1945.0e-51

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain14-6749.73.2e-13

HTH_191Helix-turn-helix domain15-5936.63.2e-09

HTH_31Helix-turn-helix18-5835.09.9e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011028635.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 14680.0e+00
WP_106518405.1 Scr1 family TA system antitoxin-like transcriptional regulat... 14640.0e+00
WP_210983663.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 14570.0e+00
WP_076974530.1 Scr1 family TA system antitoxin-like transcriptional regulat... 14020.0e+00
WP_217254466.1 Scr1 family TA system antitoxin-like transcriptional regulat... 13930.0e+00
WP_226024866.1 helix-turn-helix transcriptional regulator [Streptomyces hyd... 13910.0e+00
WP_189742665.1 Scr1 family TA system antitoxin-like transcriptional regulat... 13850.0e+00
WP_030180057.1 helix-turn-helix domain-containing protein [Streptomyces vio... 13770.0e+00
WP_189316039.1 Scr1 family TA system antitoxin-like transcriptional regulat... 13031.0e-180
12984.6e-180

PSORT result

LocalizationCertaintyPSORT said
Not Clear