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IDSCO2930 TypeCDS
From5485751 nt length648
To5485104 aa length215
Gene pI10.41
Definitionputative permease inner membrane component M.W (Da)22499
NoteSCE19A.30 AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5147 putative ABC transporter permease protein3061.0e-84
sgrSGR_4610 putative ABC transporter permease protein3552.0e-99
samSAM23877_2967 Permease membrane protein3991.0e-144
saceSACE_0077 ABC quaternary amine transporter, permease component2061.0e-54
nfarnfa30820 putative transporter permease1777.0e-46

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_11Binding-protein-dependent transport system inner membrane component33-20667.61e-18

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003975880.1 MULTISPECIES: ABC transporter permease [Streptomyces] >gb 9894.1e-135
WP_159328817.1 ABC transporter permease [Streptomyces tendae] >dbj 9861.1e-134
WP_133885453.1 ABC transporter permease [Streptomyces sp. BK208] >lcl 9861.2e-134
WP_115742374.1 MULTISPECIES: ABC transporter permease [unclassified Strepto... 9791.3e-133
WP_104636340.1 ABC transporter permease [Streptomyces sp. MH60] >gb 9755.0e-133
WP_216724603.1 ABC transporter permease subunit [Streptomyces sp. A108] >lc... 9755.5e-133
WP_030180191.1 ABC transporter permease [Streptomyces violaceorubidus] 9731.1e-132
WP_226024790.1 ABC transporter permease [Streptomyces hyderabadensis] 9722.0e-132
WP_153179627.1 MULTISPECIES: ABC transporter permease [unclassified Strepto... 9712.7e-132
AAD29278.1 ProZL [Streptomyces coelicolor A3(2)] 9752.7e-132

PSORT result

LocalizationCertaintyPSORT said
Not Clear