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IDSCO2931 TypeCDS
From5485096 nt length1275
To5483822 aa length424
Gene pI5.49
Definitionputative ABC transporter ATP-binding protein M.W (Da)46498
NoteSCE19A.31 AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5146 putative ABC transporter ATP-binding protein6860.0e+00
sgrSGR_4609 putative ABC transporter ATP-binding protein6930.0e+00
samSAM23877_2968 Glycine betaine/carnitine/choline transport ATP-binding protein OpuCA7830.0e+00
saceSACE_0078 putative ABC transporter ATP-binding protein4364.0e-123
nfarnfa30810 putative ABC transporter ATP-binding protein3871.0e-108

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC_tran1ABC transporter40-185123.57.8e-36

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
AIJ15536.1 ABC transporter ATP-binding protein [Streptomyces lividans TK24] ... 21340.0e+00
WP_003975879.1 MULTISPECIES: betaine/proline/choline family ABC transporter... 21340.0e+00
WP_121711501.1 betaine/proline/choline family ABC transporter ATP-binding p... 21280.0e+00
WP_109032671.1 betaine/proline/choline family ABC transporter ATP-binding p... 21240.0e+00
WP_087809079.1 betaine/proline/choline family ABC transporter ATP-binding p... 21040.0e+00
AAD29279.1 ProVL [Streptomyces coelicolor A3(2)] 20820.0e+00
NHI09356.1 polyamine ABC transporter ATP-binding protein [Streptomyces sp. K... 20810.0e+00
GHA69520.1 ABC transporter ATP-binding protein [Streptomyces tendae] 20800.0e+00
WP_176156236.1 betaine/proline/choline family ABC transporter ATP-binding p... 20780.0e+00
WP_125635718.1 MULTISPECIES: betaine/proline/choline family ABC transporter... 20750.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear