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IDSCO2932 TypeCDS
From5483825 nt length873
To5482953 aa length290
Gene pI11.03
Definitionputative permease inner membrane component M.W (Da)30285
NoteSCE19A.32 AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5145 putative ABC transporter permease protein3354.0e-93
sgrSGR_4608 putative ABC transporter permease protein3048.0e-84
samSAM23877_2969 ProWL4227.0e-151
saceSACE_0079 probable ABC quaternary amine transporter,permease component1723.0e-44
nfarnfa32510 putative ABC transporter permease1832.0e-47

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_11Binding-protein-dependent transport system inner membrane component111-27669.72.3e-19

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_030865452.1 MULTISPECIES: ABC transporter permease [Streptomyces] >gb 10713.4e-145
WP_003975878.1 MULTISPECIES: ABC transporter permease [Streptomyces] >gb 10705.3e-145
WP_121711503.1 ABC transporter permease [Streptomyces sp. E5N91] 10611.5e-143
WP_115742376.1 ABC transporter permease [Streptomyces sp. CB09001] >gb 10221.1e-137
MYS54526.1 ABC transporter permease subunit [Streptomyces sp. SID6013] 10176.4e-137
WP_108986613.1 ABC transporter permease [Streptomyces coelicoflavus] 10176.9e-137
WP_121701177.1 MULTISPECIES: ABC transporter permease [unclassified Strepto... 10161.1e-136
WP_059301580.1 ABC transporter permease [Streptomyces canus] 10151.5e-136
WP_127893320.1 MULTISPECIES: ABC transporter permease [unclassified Strepto... 10132.2e-136
WP_167307480.1 MULTISPECIES: ABC transporter permease [Streptomyces] 10122.7e-136

PSORT result

LocalizationCertaintyPSORT said
Not Clear