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IDSCO2935 TypeCDS
From5480466 nt length663
To5481128 aa length220
GenesdrB pI6.8
Definitionputative transcriptional regulator M.W (Da)23036
NoteSCE19A.35c AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5141 putative differentiation regulon (IclR-family transcriptional regulator)3015.0e-83
sgrSGR_4602 putative IclR-family transcriptional regulator3613.0e-101
samSAM23877_2972 Transcriptional regulator3965.0e-143
scabSCAB56321 putative differentiation regulon (IclR-family transcriptional regulator)3606.0e-101
saceSACE_0137 differentiation regulon (IclR-family transcriptional regulator)1671.0e-42
nfarnfa32430 putative transcriptional regulator1032.0e-23

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_IclR1IclR helix-turn-helix domain8-5853.21.7e-14

Rrf21Transcriptional regulator5-6025.61e-05

HTH_111HTH domain14-5022.95.6e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003975875.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 8151.9e-108
WP_115746407.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 8041.0e-106
WP_109032667.1 helix-turn-helix domain-containing protein [Streptomyces rub... 7865.1e-104
WP_133885446.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 7682.5e-101
WP_217170613.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 7596.7e-100
WP_104636346.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 7588.6e-100
WP_076974692.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 7552.6e-99
WP_202493150.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 7533.0e-99
WP_030180203.1 helix-turn-helix domain-containing protein [Streptomyces vio... 7535.6e-99
NEB11318.1 helix-turn-helix domain-containing protein [Streptomyces coelicof... 7527.1e-99

PSORT result

LocalizationCertaintyPSORT said
Not Clear