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IDSCO2966 TypeCDS
From5439979 nt length480
To5440458 aa length159
GenesmpB pI10.76
DefinitionsmpB small protein B homologue M.W (Da)18381
NoteSCE59.25c AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5107 putative small protein B2282.0e-61
sgrSGR_4561 putative small protein B2666.0e-73
samSAM23877_3001 SsrA-binding protein3212.0e-115
scabSCAB55751 putative small protein B2709.0e-74
saceSACE_1108 SsrA-binding protein1822.0e-47
nfarnfa44800 putative small protein B1736.0e-45

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SmpB1SmpB protein9-72104.71.7e-30

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003975846.1 MULTISPECIES: SsrA-binding protein SmpB [Streptomyces] >sp 8255.8e-112
WP_052841735.1 MULTISPECIES: SsrA-binding protein SmpB [Streptomyces] >gb 8221.6e-111
WP_104636570.1 SsrA-binding protein SmpB [Streptomyces sp. MH60] >gb 8212.8e-111
WP_064728176.1 MULTISPECIES: SsrA-binding protein SmpB [Streptomyces] >gb 8194.3e-111
WP_073723717.1 MULTISPECIES: SsrA-binding protein SmpB [unclassified Strept... 8194.6e-111
WP_007450171.1 MULTISPECIES: SsrA-binding protein SmpB [Streptomyces] >gb 8186.5e-111
WP_031043421.1 MULTISPECIES: SsrA-binding protein SmpB [Streptomyces] >gb 8188.5e-111
WP_217170637.1 SsrA-binding protein SmpB [Streptomyces sp. AC512_CC834] 8161.3e-110
WP_019325702.1 MULTISPECIES: SsrA-binding protein SmpB [Streptomyces] >lcl 8151.8e-110
WP_189231037.1 MULTISPECIES: SsrA-binding protein SmpB [Streptomyces] >dbj 8151.8e-110

PSORT result

LocalizationCertaintyPSORT said
Not Clear